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Until 2013

  • Publications Until 2013
  1. Silva D.N.; Talhinhas, P.; Cai, L.; Manuel, L.; Guichuru, E.K.; Loureiro, A.; Várzea, V.; Paulo, O.S.; Batista, D. /2012. Host-jump drives rapid and recent ecological speciation of the emergent fungal pathogen Colletotrichum kahawae. Molecular Ecology, 21: 2655–2670. (DOI 10.1111/j.1365-294X.2012.05557.x.).
  2. Gichuru, E.K.; Ithiru, J.M.; Silva, M.C.; Pereira, A.P.; Várzea, V.M.P. / 2012. Additional physiological races of coffee leaf rust (Hemileia vastatrix) identified in Kenya. Tropical Plant Pathology 37: 424-427.
  3. Silva, D. N.; Talhinhas, P.; Várzea, V.; Cai, L.; Paulo, O.S. & Batista, D. / 2012. Application of the Apn1/MAT locus to improve the systematics of the Colletotrichum gloeosporioides complex: an example from coffee (Coffea spp.) hosts. Mycologia 104(2):396-409 (DOI: 10.3852/11-145).
  4. Vieira, A.; Talhinhas, P.; Loureiro, A.; Duplessis, S.; Fernandez, D.; Silva, M.C.; Paulo, O.S. & Azinheira, H.G. / 2012. Expression profiling of genes involved in the biotrophic colonisation of Coffea arabica leaves by Hemileia vastatrix. European Journal of Plant Pathology 133:261-277 (DOI: 10.1007/s10658-011-9864-5).
  5. Diniz, I.; Talhinhas, P.; Azinheira, H.G.; Várzea, V.; Medeira, C.; Maia, I.; Petitot, A.-S.; Nicole, M.; Fernandez, D. & Silva, M.C. / 2012. Cellular and molecular analyses of coffee resistance to Hemileia vastatrix and non-host resistance to Uromyces vignae in the resistance-donor genotype HDT832/2. European Journal of Plant Pathology 133:141-157.(DOI: 10.1007/s10658-011-9925-9).
  6. Fernandez, D.; Tisserant, E.; Talhinhas, P.; Azinheira, H.; Vieira, A; Petitot, A.-S.; Loureiro, A.; Poulain, J.; Da Silva, C.; Silva, M.C. & Duplessis, S. / 2012. 454-pyrosequencing of Coffea arabica leaves infected by the rust fungus Hemileia vastatrix in planta expressed pathogen-secreted proteins and plant functions triggered in a late compatible plant-rust interaction. Molecular Plant Pathology 13(1): 17-37. (DOI: 10.1111/J.1364-3703.2011.00723.x).
  7. Inácio, M.L.; Henriques, J.; Guerra-Guimarães, L.; Gil Azinheira, H.; Lima, A. & Sousa, E. / 2011. Platypus cylindricus Fab. (Coleoptera: Platypodidae) transports Biscogniauxia mediterranea agent of cork oak charcoal canker. Boletin de Sanidad Vegetal Plagas 37: 181-186.
  8. Loureiro, A.; Nicole, M.; Várzea, V.; Moncada, P.; Bertrand, B. & Silva, M.C. / 2012. Coffee resistance to Colletotrichum kahawae is associated with lignification, accumulation of phenols and cell death at infection sites. Physiological and Molecular Plant Pathology 77: 23-32. (DOI: 10.1016/j.pmpp.2011.11.002).
  9. Loureiro, A.; Guerra-Guimarães, L.; Lidon, F.C.; Bertrand, B.; Silva, M.C. & Várzea, V. / 2011. Izoenzymatic characterization of Colletotrichum kahawae isolates with different levels of agressiveness. Tropical Plant Pathology 36(5): 287-293.
  10. Vieira, A.; Talhinhas, P.; Loureiro, A.; Duplessis, S.; Fernandez, D.; Silva, M.C.; Paulo, O.S. & Azinheira, H.G. / 2011. Validation of RT-qPCR reference genes for in planta expression studies in the obligate biotrophic pathogen Hemileia vastatrix, the causal agent of coffee leaf rust. Fungal Biology 115 (9): 891-901. (DOI: 10.1016/j.funbio.2011.07.002).
  11. Talhinhas, P.; Mota-Capitão, C.; Martins, S.; Ramos, A.P.; Neves-Martins, J.; Guerra-Guimarães, L.; Várzea, V.; Silva, M.C.; Sreenivasaprasad, S. & Oliveira, H. / 2011. Epidemiology, histopathology and aetiology of olive anthracnose caused by Colletotrichum acutatum and C. gloeosporioides in Portugal. Plant Pathology 60(3): 483-495. (DOI: 10.1111/j.1365-3059.2010.02397.x).
  12. Ramos, A.P.; Talhinhas, P.; Sreenivasaprasad, S. & Oliveira, H. / 2011. Caracterização morfológica e molecular de isolados de Colletotrichum gloeosporioides associados à antracnose dos citrinos em Portugal. In Engenharia dos biossistemas: cem temas de investigação no centenário do ISA. (Eds. Santos-Pereira, L.; de Varennes, A.; Oliveira, C. & Ferreira-Dias, S.). pp. 251-254. Edições Colibri e CEER – Centro de Engenharia dos Biossistemas. Lisboa.
  13. Talhinhas, P.; Neves-Martins, J.; Sreenivasaprasad, S. & Oliveira, H. / 2011. A estrutura populacional de Colletotrichum spp. associadas à gafa da oliveira em Portugal sugere a existência dum centro de diversidade genética de Olea europaea no Algarve. In Engenharia dos biossistemas: cem temas de investigação no centenário do ISA. (Eds. Santos-Pereira, L.; de Varennes, A.; Oliveira, C. & Ferreira-Dias, S.). pp. 247-250. Edições Colibri e CEER – Centro de Engenharia dos Biossistemas. Lisboa.
  14. Azinheira, H.G.; Silva, M.C.; Talhinhas, P.; Medeira, C.; Maia, I.; Petitot, A.-S. & Fernandez, D. / 2010. Non-host resistance responses of Arabidopsis thaliana to the coffee leaf rust fungus (Hemileia vastatrix). Botany 88(7): 621-629.
  15. Evaristo, I., Batista, D., Correia, I., Costa, R. (2010) Chemical profiling of Portuguese Pinus pinea L. Nuts. Journal of the Science of Food and Agriculture, 90 (6): 1041–1049. (DOI 10.1002/jsfa.3914).​
  16. Evaristo, I.; Batista, D.; Correia, I.; Correia, P. & Costa, R. / 2010. Chemical profiling of Portuguese Pinus pinea L. nuts. Journal of the Science of Food and Agriculture 90(6):1041-1049.
  17. Manuel, L.; Talhinhas, P.; Várzea, V. & Neves-Martins, J. / 2010. Characterisation of Colletotrichum kahawae Isolates Causing Coffee Berry Disease in Angola. Journal of Phytopathology 158(4):310-313.
  18. Guerra-Guimarães, L.; Silva, M.C.; Struck, C.; Loureiro, A.; Nicole, M.; Rodrigues Jr., C.J. & Ricardo, C.P.P. / 2009. Chitinases of Coffea arabica genotypes resistant to orange rust Hemileia vastatrixBiologia Plantarum 53: 702-706.
  19. Silva, M.C.; Guerra-Guimarães, L.; Loureiro, A. & Nicole, M. / 2008. Involvement of peroxidases in the coffee resistance to orange rust (Hemileia vastatrix). Physiological and Molecular Plant Pathology 72: 29-38.
  20. Mahé, L.; Combes, M.C.; Várzea, V.M.P.; Guilhaumon, C. & Lashermes, P. / 2008. Development of sequence characterized DNA markers linked to leaf rust (Hemileia vastatrix) resistance in coffee (Coffea arabica L.). Molecular Breeding 21: 105-113.
  21. Mahé, L.; Várzea, V.M.P.; Le Pierrès, D.; Combes, M.C. & Lashermes, P. / 2007. A new source of resistance against coffee leaf rust from New-Caledonian natural interspecific hybrids between Coffea arabica and C. canephoraPlant breeding 126: 638-641.
  22. Ganesh, D.; Petitot, A.-S.; Alary, R.; Silva, M.C.; Lecouls, A.-C. & Fernandez, D. / 2006. Monitoring of the early resistance responses of coffee (Coffea arabica L.) to the rust fungus (Hemileia vastatrix) using real-time RT-PCR.
    Plant Science 170:1045-1051.
  23. Silva, M.C.; Várzea, V.; Guerra-Guimarães, L.; Azinheira, H.G.; Fernandez, D.; Petitot, A.-S.; Bertrand, B.; Lashermes, P. & Nicole, M. / 2006. Coffee resistance to the main diseases: leaf rust and coffee berry disease. Brazilian Journal of Plant Physiology 18(1): 119-147.
  24. Várzea, V.M.P.; Dias, M.; Silva, M.C.; Luzolo, M.; Correia, A.M.; Talhinhas, P. & Neves Martins, J. / 2006. Ferrugem alaranjada e antracnose dos frutos verdes do cafeeiro em Angola. Cooperação técnico-científica luso-angolana. In: Moreira I. (ed.), Angola. Agricultura, Recursos Naturais e Desenvolvimento Rural. Vol. II, Cap. 30, ISA Press. ISA/UTL pp. 105-121.
  25. Anthony, F.; Topart, P.; Martinez, A.; Silva, M.C. & Nicole, M. / 2005. Hypersensitive-like reaction induced by the coffee gene Mex-1 of resistance to Meloidogyne exiguaPlant Pathology 54: 476-482.
  26. Gouveia, M.M.C.; Ribeiro, A.; Várzea, V.M.P. & Rodrigues Jr., C.J. / 2005. Genetic diversity in Hemileia vastatrix based on RAPD markers. Mycologia 97: 396-404
  27. Lashermes, P.; Combes, M.C.; Mahé, L.; Noir, S.; Prakash, N.S. & Várzea, V.M.P. / 2005. Progress in genetic and physical mapping of a leaf rust resistance locus in coffee. In: Zambolim L, Zambolim E, Várzea VMP (eds). Durable Resistance to Coffee Leaf Rust. Universidade Federal de Viçosa, Viçosa, Brasil. pp. 333-361.
  28. Lecouls, A.C.; Petitot, A.-S.; Marmey, P.; Silva, M.C.; Guerra-Guimarães, L.; Nicole, M. & Fernandez, D. / 2005. Physiology and defence mechanisms to pathogens in tropical woody plants. In: Molecular Biology of Tropical Plants. Recent Research Developments in Microbiology, Research Signpost, Trivandrum, Kerala, India. pp. 1-15.
  29. Silva, M.C.; Guerra-Guimarães, L. & Nicole, M. / 2005. Cytological and biochemical mechanisms involved in coffee leaf rust resistance. In: Zambolim L, Zambolim E, Várzea VMP (eds). Durable Resistance to Coffee Leaf Rust. Universidade Federal de Viçosa, Viçosa, Brasil. pp. 249-283
  30. Várzea, V.M.P. & Duarte, D.V. / 2005. Population variability of Hemileia vastatrix vs. coffee durable resistance. In: Zambolim L, Zambolim E, Várzea VMP (eds). Durable Resistance to Coffee Leaf Rust. Universidade Federal de Viçosa, Viçosa, Brasil. pp. 53-74.
  31. Chen, Z.; Nunes, M.A.; Silva, M.C. & Rodrigues Jr., C.J. / 2004. Apressorium turgor pressure of Colletotrichum kahawae may have a role in coffee cuticle penetration. Mycologia 96 (6): 1199–1208.
  32. Fernandez, D.; Santos, P.; Agostini, C.; Bon, M.-C.; Petitot, A.-S.; Silva, M.C.; Guerra-Guimarães, L.; Ribeiro, A.; Argout, X. & Nicole, M. / 2004. Coffee (Coffea arabica L.) genes early expressed during infection by the rust fungus (Hemileia vastatrix). Molecular Plant Pathology 5: 527-536.
  33. Prakash, N.S.; Marques, D.V.; Várzea, V.M.P., Silva, M.C.; Combes, M.C. & Lashermes, P. / 2004. Introgression molecular analysis of a leaf rust resistance gene from Coffea liberica into Coffea arabica L. Theoretical Applied Genetics 109: 1311-1317.
  34. Rodrigues Jr., C.J.; Gonçalves, M.M. & Várzea, V.M.P. / 2004. Importância do híbrido de Timor para o território e para o melhoramento da cafeicultura mundial. Revista de Ciências Agrárias, Vol. XXVII, Número(s) 2/4. p 203-216.
  35. Várzea, V.M.P.; Silva, M.C.; Guerra-Guimarães, L.; Ribeiro, A.; Gouveia, M.; Azinheira, H. & Rodrigues Jr., C.J. / 2004. Coffee leaf rust: a brief review In: Associação Portuguesa de Biologia Vegetal e Agro-Industrial (eds). Biologia Vegetal e Agro-Industrial. Vol. 1, Edições Sílabo. pp. 87-102.
  36. Chen, Z.J,; Ribeiro, A.; Silva, M.C,; Santos, P.; Guerra-Guimarães, L.; Gouveia, M.M.C.; Fernandez, D. & Rodrigues Jr., C.J. / 2003. Heat shock-induced susceptibility of green coffee leaves and berries to Colletotrichum gloeosporioides and its association to PR- and hsp70 gene expression. Physiological and Molecular Plant Pathology 63: 181-190.
  37. Várzea, V.M.P.; Rodrigues Jr., C.J. & Lewis, B.G. / 2002. Distinguishing characteristics and vegetative compatibility of Colletotrichum kahawae in comparison with other related species from coffee. Plant Pathology 51: 202-207
  38. Silva, M.C.; Nicole, M.; Guerra-Guimarães, L. & Rodrigues Jr., C.J. / 2002. Hypersensitive cell death and post-haustorial defense responses arrest the orange rust (Hemileia vastatrix) growth in resistant coffee leaves.
    Physiological and Molecular Plant Pathology 60 (4):169-183.
  39. Várzea, V.M.P.; Rodrigues Jr., C.J.; Silva, M.C.; Gouveia, M.; Marques, D.V.; Guerra-Guimarães, L. & Ribeiro, A. / 2002. Resistência do cafeeiro à Hemileia vastatrix. In: Zambolim L. (ed.). O Estado da Arte de Tecnologias na Produção de Café. Universidade Federal de Viçosa, Viçosa, Brasil. pp. 297-320.
  40. Várzea, V.M.P.; Silva, M.C. & Rodrigues Jr., C.J. / 2002. Resistência à antracnose dos frutos verdes do cafeeiro.
    In: Zambolim L. (ed.). O Estado da Arte de Tecnologias na Produção de Café. Universidade Federal de Viçosa, Viçosa, Brasil. pp. 321-366.
  41. Gichuru, E.K.; Várzea, V.M.P.; Rodrigues Jr., C.J. & Masaba, D.M. / 2000. Vegetative compatibility grouping of Colletotrichum kahawae in Kenya. J. Phytopatology 148: 233-237.
  42. Silva, M.C.; Nicole, M.; Rijo, L.; Geiger, J.P. & Rodrigues Jr., C.J. / 1999. Cytochemical aspects of the plant-rust fungus interface during the compatible interaction Coffea arabica (cv. Caturra)-Hemileia vastatrix (race III). International Journal of Plant Science 160(1): 79-91.
  43. Beynon, S.M.; Coddington, A.; Lewis, B.G. & Várzea, V.M.P. / 1995. Genetic variation in the coffee berry disease pathogen, Colletotrichum kahawaePhysiological and Molecular Plant Pathology 46: 457-470.
  44. Guedes, M.E.M.; Silva, A.M.S.; Cavaleiro, J.A.S. & Guerra-Guimarães, L. / 1994. Total phenols and phytoalexins accumulation in coffee leaves infected with Hemileia vastatrix Berk. & Br. and Pseudomonas syringaeActa Horticulturae 381: 561-564.
  45. Bettencourt, A.J.; Lopes, J. & Palma, S. / 1992. Factores genéticos que condicionam a resistência às raças de Hemileia vastatrix Berk. et Br. dos clones tipo dos grupos 1,2 e 3 de derivados de Híbrido de Timor. Brotéria Genética. Lisboa, XIII (LXXX): 185-194.
  46. Rodrigues Jr., C.J. / 1992. Professor Branquinho d'Oliveira: a portuguese leader in plant pathology.
    Annual Review of Phytopathology 30: 39-45.
  47. Rodrigues Jr., C.J.; Várzea, V.M.P.; Hindorf, H. & Medeiros, E.F. / 1991
    Strains of Colletotrichum coffeanum Noack causing Coffee Berry Disease in Angola and Malawi with characteristics different to Kenya strain. Journal of Phytopathology 131: 205-209.
  48. Bettencourt, A.J. & Rodrigues Jr., C.J. / 1988. Principles and practice of coffee breeding for resistance to rust and other diseases. In: Clarke RJ, Macrae R (eds). Coffee Agronomy, Vol. 4. Elsevier Applied Science Publishers LTD, London, pp.199-234.
  49. Rodrigues Jr., C.J. / 1984. Coffee rust races and resistance. In: Fulton RH (ed.). Coffee rust in Americas. Symposium Book 2, St. Paul, Minnesota, The American Phytopathological Society, pp. 41-58.
  50. Bettencourt, A.J. / 1981. Melhoramento genético do cafeeiro. Transferência de factores de resistência à H. vastatrix Berk & Br. para as principais cultivares de Coffea arabica L.. Centro de Investigação das Ferrugens do Cafeeiro (CIFC/IICT). Lisboa. 93p.
  51. Bettencourt, A.J.; Noronha-Wagner, M. & Lopes, J. / 1980. Factor genético que condiciona a resistência do clone 1343/269 (Híbrido de Timor) à Hemileia vastatrix Berk & Br.. Brotéria Genética, I (LXXVI):53-58.
  52. Marques, D.V. & Bettencourt, A.J. / 1979
    Resistência à Hemileia vastatrix numa população de cafeeiros Icatú. Garcia de Orta (Ser. Estud. Agron.) Lisboa, 6(1-2):19-24.
  53. Rodrigues Jr., C.J. / 1977. Coffee (Coffea spp.). In: Hewitt WB (ed.). Plant health and quarantine in international transfer of genetic resources. Chiarappa L CRC Press, Cleveland, Ohio, pp.137-154.
  54. Bettencourt, A.J.; Lopes, J. & Godinho, I.L. / 1975. Transferência de factores de resistência à Hemileia vastatrix do Híbrido de Timor para a cultivar Caturra Vermelho de Coffea arabicaGarcia de Orta (Ser. Estud. Agron.), 6(1-2):11-18.
  55. Rodrigues Jr., C.J.; Bettencourt, A.J. & Rijo, L. / 1975. Races of the pathogen and resistance to coffee rust. Annual Review of Phytopathology 13:49-70.
  56. Rijo, L. & Sargent, J.A. / 1974. The fine structure of the coffee leaf rust, Hemileia vastatrixCanadian Journal of Botany 52: 1363-1367
  57. Rodrigues Jr., C.J. / 1974. Resistance in coffee to the orange and powdery rusts. American Phytopathological Society Meeting, México. Inst. Interam. Cienc. Agro. México Publicacion miscelanea 126:52-64.
  58. Bettencourt, A.J. & Noronha-Wagner, M. / 1971. Genetic factors conditioning resistance of Coffea arabica L. to Hemileia vastatrix Berk & Br.. Agronomia Lusitana 31(4):285-292.
  59. Bettencourt, A.J. & Carvalho, A. / 1968. Melhoramento visando a resistência do cafeeiro à ferrugem. Bragantia, 27 (4):35-68.
  60. Noronha-Wagner, M. & Bettencourt, A.J. / 1967. Genetic study of the resistance of Coffea spp. to leaf rust. I. Identification and behaviour of four factors conditioning disease reaction in Coffea arabica to twelve physiologic races of Hemileia vastatrixCanadian Journal of Botany 45:2021-2031.
  61. Bettencourt, A.J. & Rodrigues Jr., C.J. / 1965. Routine screening for resistance to Hemileia vastatrix B. & Br. on Coffea canephora Pierre and Coffea accessions from different regions of the world. Progress Report 1960-1965, Coffee Rusts Research Center, pp. 100-120.
  62. Bettencourt, A.J.; Rodrigues Jr., C.J. & Lopes, J. / 1965. Routine testing of rust (Hemileia vastatrix B. & Br.) samples from different areas of the world for surveying the geographical distribution of the rust physiologic races. Progress Report 1960-1965, Coffee Rusts Research Center, pp. 28-46.
  63. Rodrigues Jr., C.J. & Bettencourt, A.J. / 1965. Routine screening for resistance to Hemileia vastatrix B. & Br. on Coffea arabica L. accessions from different coffee producing regions of the world. Progress Report 1960-1965, Coffee Rusts Research Center, pp. 47-99.
  64. Rodrigues Jr., C.J.; Bettencourt, A.J.& Lopes, J. / 1965. Study of the physiologic specialization of the coffee rust Hemileia vastatrix B. & Br. and selection of coffee clones for the establishment of a standard range of differential hosts for this rust. Progress Report 1960-1965, Coffee Rusts Research Center, pp. 21-27.
  65. D’Oliveira, B. & Rodrigues Jr., C.J. / 1961. O problema das ferrugens do cafeeiro. Revista do Café Português 8: 5-50. (Original em língua inglesa apresentado à 1ª Reunião Técnica da FAO, Abidjan, Costa do Marfim, Outubro de 1960).
  66. D’Oliveira B. / 1958. Advances in Coffee Production Technology:Selection of coffee types resistant to the Hemileia leaf rust. Coff. & Tea Ind. Fla, Field. 81-112-120.
  67. D’Oliveira B. / 1954-57. As ferrugens do cafeeiro. Revista do Café Português. 1(4): 5-13; 2(5): 5-12; 2(6): 5-13; 2(7): 9-17; 2(8): 5-22; 4(16): 5-15.asdasd